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Chalcogen Bonds Involving Selenium in Protein Structures

Oliviero Carugo, Giuseppe Resnati, Pierangelo Metrangolo

2021ACS Chemical Biology74 citationsDOIOpen Access PDF

Abstract

Chalcogen bonds are the specific interactions involving group 16 elements as electrophilic sites. The role of chalcogen atoms as sticky sites in biomolecules is underappreciated, and the few available studies have mostly focused on S. Here, we carried out a statistical analysis over 3562 protein structures in the Protein Data Bank (PDB) containing 18 266 selenomethionines and found that Se···O chalcogen bonds are commonplace. These findings may help the future design of functional peptides and contribute to understanding the role of Se in nature.

Topics & Concepts

ChalcogenProtein Data Bank (RCSB PDB)SeleniumBiomoleculeChemistryProtein Data BankCrystallographyProtein structureStereochemistryBiochemistryOrganic chemistryEnzyme Structure and FunctionProtein Hydrolysis and Bioactive PeptidesProtein Structure and Dynamics