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Case Report: A Severe and Multi-Site Nocardia farcinica Infection Rapidly and Precisely Identified by Metagenomic Next-Generation Sequencing

Mengfan Jiao, Xiang Deng, Hongfu Yang, Junqiang Dong, Jun Lv, Fang Li

2021Frontiers in Medicine25 citationsDOIOpen Access PDF

Abstract

Nocardia genus is an aerobic, gram-positive, and opportunistic pathogen, which mainly affects cell-mediated immunosuppressed patients. Early diagnosis and treatment greatly improve prognosis. However, the limitation of golden standard-bacterial culture exists. Here, we report a 61-year-old male with pneumonia, sepsis and intermuscular abscesses induced by Nocardia farcinica . Venous blood culture reported negative results. Former improper diagnosis and treatment did not improve his condition. With the assistant of metagenomic next-generation sequencing, the pathogen was identified as Nocardia farcinica . He was then applied with accurate treatment and had a remarkable clinical and radiological improvement.

Topics & Concepts

NocardiaPathogenMetagenomicsPneumoniaBiologyOpportunistic pathogenMicrobiologyNocardiosisSepsisBacteriaImmunologyMedicineInternal medicineGeneticsGenePseudomonas aeruginosaActinomycetales infections and treatmentInfectious Diseases and MycologyInfectious Disease Case Reports and Treatments