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Sequence Determines the Switch in the Fibril Forming Regions in the Low-Complexity FUS Protein and Its Variants

Abhinaw Kumar, Debayan Chakraborty, Mauro L. Mugnai, John E. Straub, D. Thirumalai

2021The Journal of Physical Chemistry Letters31 citationsDOIOpen Access PDF

Abstract

Residues spanning distinct regions of the low-complexity domain of the RNA-binding protein, Fused in Sarcoma (FUS-LC), form fibril structures with different core morphologies. Solid-state NMR experiments show that the 214-residue FUS-LC forms a fibril with an S-bend (core-1, residues 39-95), while the rest of the protein is disordered. In contrast, the fibrils of the C-terminal variant (FUS-LC-C; residues 111-214) have a U-bend topology (core-2, residues 112-150). Absence of the U-bend in FUS-LC implies that the two fibril cores do not coexist. Computer simulations show that these perplexing findings could be understood in terms of the population of sparsely populated fibril-like excited states in the monomer. The propensity to form core-1 is higher compared to core-2. We predict that core-2 forms only in truncated variants that do not contain the core-1 sequence. At the monomer level, sequence-dependent enthalpic effects determine the relative stabilities of the core-1 and core-2 topologies.

Topics & Concepts

Sequence (biology)FibrilComputational biologyBiologyEvolutionary biologyBiophysicsComputer scienceGeneticsSignaling Pathways in DiseaseRNA Research and SplicingCancer-related gene regulation