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Single-cell sequencing reveals the heterogeneity of pancreatic neuroendocrine tumors under genomic instability and histological grading

Ye Zeng, Yan Zhou, Yuheng Hu, Qiang Li, Zijin Xu, Xin Lou, Wuhu Zhang, Di Zhu, Cao Xie, Qingtong Zhou, Jing Gao, Hu Zhou, Dehua Yang, Yi Qin, Xiaowu Xu, Jie Chen, Shunrong Ji, Ming‐Wei Wang, Xianjun Yu

2024iScience15 citationsDOIOpen Access PDF

Abstract

Histological grading is the key factors affecting the prognosis and instructive in guiding treatment and assessing recurrence in non-functional pancreatic neuroendocrine tumor (NF-Pan-NET). Approximately one-third of patients without copy number variation (CNV) alteration and the prognosis of these patients are better than that of patients with CNV alteration. However, the difference between CNV and histological grading is unclear. Here, we analyzed the heterogeneity of tumor cells according to two classification criteria, genomic instability (including CNV alteration and tumor mutation burden) and histological grading. We revealed that the activated core pathways of tumor cells were significantly different under different histological grading's and genomic instability patterns. We also found that tip cells, lymphatic endothelial cells, macrophages, CD1A + dendritic cell, Treg, MAIT, ILC, and CAFs might participate in the process of hepatic metastases, which will facilitate the understanding of the patterns to decode the malignant potential and of NF-Pan-NET.

Topics & Concepts

Grading (engineering)Genome instabilityNeuroendocrine tumorsPathologyBiologyChromosome instabilityPancreatic cancerCopy-number variationCancer researchMedicineCancerGeneGeneticsGenomeDNADNA damageEcologyChromosomeNeuroendocrine Tumor Research AdvancesLung Cancer Research StudiesPancreatic and Hepatic Oncology Research
Single-cell sequencing reveals the heterogeneity of pancreatic neuroendocrine tumors under genomic instability and histological grading | Litcius