Roles of the ubiquitin ligase CUL4B and ADP-ribosyltransferase TiPARP in TCDD-induced nuclear export and proteasomal degradation of the transcription factor AHR
Mercedes Paz Rijo, Silvia Diani-Moore, Chenyi Yang, Pengbo Zhou, Arleen B. Rifkind
Abstract
The aryl hydrocarbon receptor (AHR) is a transcription factor activated by exogenous halogenated polycyclic aromatic hydrocarbon compounds, including the environmental toxin TCDD, 2,3,7,8-tetrachlorodibenzo-p-dioxin, and naturally occurring dietary and endogenous compounds. The activated AHR enhances transcription of specific genes including phase I and phase II metabolism enzymes and other targets genes such as the TCDD-inducible poly(ADP-ribose) polymerase (TiPARP). The regulation of AHR activation is a dynamic process: immediately after transcriptional activation of the AHR by TCDD, the AHR is exported from the nucleus to the cytoplasm where it is subjected to proteasomal degradation. However, the mechanisms regulating AHR degradation are not well understood. Here, we studied the role of two enzymes reported to enhance AHR breakdown: the cullin 4B (CUL4B)AHR complex, an E3 ubiquitin ligase that targets the AHR and other proteins for ubiquitination, and TiPARP, which targets proteins for ADP-ribosylation, a posttranslational modification that can increase susceptibility to degradation. Using a WT mouse embryonic fibroblast (MEF) cell line and an MEF cell line in which CUL4B has been deleted (MEFCul4b-null), we discovered that loss of CUL4B partially prevented AHR degradation after TCDD exposure, while knocking down TiPARP in MEFCul4b-null cells completely abolished AHR degradation upon TCDD treatment. Increased TCDD-activated AHR protein levels in MEFCul4b-null and MEFCul4b-null cells in which TiPARP was knocked down led to enhanced AHR transcriptional activity, indicating that CUL4B and TiPARP restrain AHR action. This study reveals a novel function of TiPARP in controlling TCDD-activated AHR nuclear export and subsequent proteasomal degradation. The aryl hydrocarbon receptor (AHR) is a transcription factor activated by exogenous halogenated polycyclic aromatic hydrocarbon compounds, including the environmental toxin TCDD, 2,3,7,8-tetrachlorodibenzo-p-dioxin, and naturally occurring dietary and endogenous compounds. The activated AHR enhances transcription of specific genes including phase I and phase II metabolism enzymes and other targets genes such as the TCDD-inducible poly(ADP-ribose) polymerase (TiPARP). The regulation of AHR activation is a dynamic process: immediately after transcriptional activation of the AHR by TCDD, the AHR is exported from the nucleus to the cytoplasm where it is subjected to proteasomal degradation. However, the mechanisms regulating AHR degradation are not well understood. Here, we studied the role of two enzymes reported to enhance AHR breakdown: the cullin 4B (CUL4B)AHR complex, an E3 ubiquitin ligase that targets the AHR and other proteins for ubiquitination, and TiPARP, which targets proteins for ADP-ribosylation, a posttranslational modification that can increase susceptibility to degradation. Using a WT mouse embryonic fibroblast (MEF) cell line and an MEF cell line in which CUL4B has been deleted (MEFCul4b-null), we discovered that loss of CUL4B partially prevented AHR degradation after TCDD exposure, while knocking down TiPARP in MEFCul4b-null cells completely abolished AHR degradation upon TCDD treatment. Increased TCDD-activated AHR protein levels in MEFCul4b-null and MEFCul4b-null cells in which TiPARP was knocked down led to enhanced AHR transcriptional activity, indicating that CUL4B and TiPARP restrain AHR action. This study reveals a novel function of TiPARP in controlling TCDD-activated AHR nuclear export and subsequent proteasomal degradation. 2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD, dioxin), a byproduct of incineration and other industrial processes, is a ubiquitous environmental contaminant whose toxic effects, widely observed in different species, include developmental defects, cancer, a wasting syndrome, hepatosteatosis, thymus involution, and dysregulation of immune responses (1Poland A. Knutson J.C. 2,3,7,8-Tetrachlorodibenzo-p-dioxin and related halogenated aromatic hydrocarbons: Examination of the mechanism of toxicity.Annu. Rev. Pharmacol. Toxicol. 1982; 22: 517-554Crossref PubMed Scopus (2291) Google Scholar, 2Diani-Moore S. Shoots J. Singh R. Zuk J.B. Rifkind A.B. NAD(+) loss, a new player in AhR biology: Prevention of thymus atrophy and hepatosteatosis by NAD(+) repletion.Sci. Rep. 2017; 7: 2268Crossref PubMed Scopus (25) Google Scholar, 3Bock K.W. Kohle C. 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Upon ligand binding, the AHR moves into the nucleus where it dimerizes with the aryl hydrocarbon receptor nuclear translocator (ARNT) protein to produce an AHR/ARNT heterodimer that activates gene transcription by binding to dioxin-responsive elements, specific DNA sequences in the promoter regions of AHR-responsive genes, that is, phase I (oxidation) and phase II (conjugation) drug-metabolism enzymes (including cytochrome P450 enzymes in the CYP1A and CYP1B families (mammalian cyp1a1, cyp1a2, and cyp1b1), and many other targets including TCDD-inducible poly(ADP-ribose) polymerase (TiPARP) (also known as PARP7 and ARTD14)), and the aryl hydrocarbon receptor repressor (8Beischlag T.V. Luis Morales J. Hollingshead B.D. Perdew G.H. The aryl hydrocarbon receptor complex and the control of gene expression.Crit. Rev. Eukaryot. Gene Expr. 2008; 18: 207-250Crossref PubMed Scopus (519) Google Scholar, 9Ma Q. Baldwin K.T. Renzelli A.J. McDaniel A. Dong L. 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L. S. J.P. J. 2,3,7,8-Tetrachlorodibenzo-p-dioxin poly(ADP-ribose) polymerase is a and repressor of aryl hydrocarbon receptor Res. PubMed Scopus Google Scholar), and has been to for and proteasomal degradation of proteins R. and molecular to 2017; PubMed Scopus Google Scholar). we TiPARP can to AHR degradation after TCDD in the of CUL4B or CUL4B is for TiPARP action. that TiPARP by AHR protein levels in TCDD WT MEF and MEFCul4b-null cells with cells with TCDD indicating that TiPARP can degradation of the AHR in the of The of TiPARP and loss of CUL4B in MEFCul4b-null AHR protein levels TiPARP or loss of CUL4B indicating that TiPARP and CUL4B have in AHR degradation. AHR protein levels after TiPARP in WT MEF and MEFCul4b-null cells by transcriptional of the as by levels of the AhR gene a in levels the TiPARP for the AHR protein levels in TCDD MEFCul4b-null cells AHR protein levels in control MEFCul4b-null cells TiPARP we with a of the TiPARP gene in MEFCul4b-null cells as in the loss of TiPARP, we several (including several and a that TiPARP S. S. Rifkind A.B. hydrocarbon receptor activation by targets for via poly(ADP-ribose) polymerase Biol. Full Text Full Text PDF PubMed Scopus (25) Google but of not the of the loss of TiPARP protein by we the of in the TiPARP gene by of of the TiPARP gene The that we a cell line that of to a the of the TiPARP gene WT MEFCul4b-null and MEFCul4b-null cells in which TiPARP was knocked down with TCDD or for or and by to TCDD on AHR protein levels in cell that after of TCDD AHR protein levels by in the WT MEF while the AHR by in the MEFCul4b-null in TCDD not AHR protein of the AHR protein was in WT MEF cells and was by in MEFCul4b-null in AhR degradation by TCDD was completely AHR protein levels with AHR transcriptional as and in cells MEFCul4b-null cells after TCDD that AHR degradation by TCDD is completely abolished in the of CUL4B and TiPARP and that TiPARP AHR degradation in the of the AHR protein levels with the loss of CUL4B and TiPARP have other of AHR The of the is of the line of in the cell and Rev. 2001; PubMed Scopus Google Scholar). has been reported that AHR activation an by TiPARP in the cell S. 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PubMed Scopus Google Scholar). we the of TCDD on the in WT and the cell with a that to the of by of the cells with TCDD or for that in WT the of levels control and TCDD not in control and MEFCul4b-null of TiPARP and CUL4B the of by in control and with a role for TiPARP in by TCDD-activated WT MEF cells with with cells with a control indicating that not TCDD-activated AHR transcriptional in The that loss of CUL4B or TiPARP can have as by in and Pollenz Pollenz R.S. hydrocarbon receptor into the nucleus ligand binding is degraded via the nuclear Biol. 1999; Full Text Full Text PDF PubMed Scopus Google and cell that the TCDD-activated AHR export from the nucleus to the cytoplasm to be degraded by the the of protein export from the nucleus on AHR WT MEF the cells with or TCDD and different of an of (also known as B. M. S. M. of nuclear export by binding to Cell Res. PubMed Scopus Google Scholar), which the nuclear export of proteins including the AHR Pollenz R.S. hydrocarbon receptor into the nucleus ligand binding is degraded via the nuclear Biol. 1999; Full Text Full Text PDF PubMed Scopus Google Scholar). led to of the AHR in the nucleus in WT MEF cells in a AHR protein levels in the with the of AHR nuclear export we studied the of the AHR by in WT MEF cells with the or TCDD with or a that not cell 4B that the AHR resides in the cytoplasm of control cells and was by TCDD by The AHR protein in the as by the of the AHR and the nuclear with TCDD the AHR in the nucleus with the in and by and Pollenz Pollenz R.S. hydrocarbon receptor into the nucleus ligand binding is degraded via the nuclear Biol. 1999; Full Text Full Text PDF PubMed Scopus Google reported that nuclear export to of the AHR in the study the of CUL4B and TiPARP in AHR nuclear we MEFCul4b-null and cells with WT MEF cells with or TCDD for and nuclear and that AHR protein levels by in the nuclear of MEFCul4b-null cells with the control MEFCul4b-null and the loss of TiPARP in to the loss of CUL4B in cells a of the AHR in the nucleus that in the of WT the AHR was was a in the of MEFCul4b-null and cells cell the by by and that TCDD not to AHR degradation in and that the AHR was in the nucleus it was in the cytoplasm in with the in and which that the AHR is not degraded and in the nucleus after TCDD in of nuclear export by on AHR levels after TCDD in indicating that the loss of CUL4B and TiPARP is to the nuclear export of the that in the of CUL4B and TiPARP, the AHR is not exported from the nucleus to the cytoplasm and in the the of the role of TiPARP in regulating AHR nuclear export and we WT MEF cells and as for to that we a cell line that of to the of the TiPARP gene and WT MEF cells with or TCDD that cells AHR levels WT that AHR protein in the nucleus of AHR levels in cells by and and also AHR levels and in the of TiPARP by CUL4B in cells with a CUL4B or and with the or TCDD that CUL4B a of AHR levels in and nuclear of cells after TCDD CUL4B was the levels of endogenous CUL4B in WT cells in and that TiPARP has a CUL4B in TCDD-activated AHR nuclear export and proteasomal degradation. AHR which occurs after TCDD is an in regulating AHR signaling (10Pollenz R.S. The mechanism of AH receptor protein down-regulation (degradation) and its impact on AH receptor-mediated gene regulation.Chem. Biol. Interact. 2002; 141: 41-61Crossref PubMed Scopus (183) Google Scholar, Pollenz R.S. hydrocarbon receptor into the nucleus ligand binding is degraded via the nuclear Biol. 1999; Full Text Full Text PDF PubMed Scopus Google Scholar, R.S. of the complex nuclear export and aryl hydrocarbon receptor-mediated gene Biol. PubMed Scopus Google Scholar). Using MEF cell we studied the of two factors that AHR protein the E3 ubiquitin ligase complex and the AHR the that are as CUL4B and TiPARP to AHR protein TiPARP has a CUL4B in AHR proteasomal and loss of CUL4B and TiPARP completely AHR degradation. that loss of CUL4B and TiPARP can have on AHR transcriptional and action. of the AHR from the nucleus to the cytoplasm is for AHR proteasomal degradation (10Pollenz R.S. 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PubMed Scopus Google that TiPARP and targets for proteasomal degradation and other nuclear transcriptional that is, and the by nuclear with the E3 ubiquitin ligase and several other E3 ubiquitin that AHR degradation occurs via the in the of the E3 ubiquitin ligase CUL4B as abolished AHR degradation in MEFCul4b-null cells the role for E3 ubiquitin ligase in AHR degradation. are to or reported E3 ubiquitin ligase is in activated AHR proteasomal degradation. also that TiPARP and CUL4B have in AHR transcriptional as AHR protein levels by the loss of CUL4B or CUL4B and TiPARP to enhanced TCDD of and and and are with that of AHR proteasomal degradation (10Pollenz R.S. The mechanism of AH receptor protein down-regulation (degradation) and its impact on AH receptor-mediated gene regulation.Chem. Biol. Interact. 2002; 141: 41-61Crossref PubMed Scopus (183) Google and TiPARP L. L. S. J.P. 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Rifkind A.B. tryptophan CYP1A in and in Sci. 2006; PubMed Scopus Google Scholar). and as TCDD in from in from mouse was by MEF cells in with and The cells for with TCDD or the in was for the of to of was with of and to The was for for and for The was in was in a of and and the of The for and are in the WT MEF or MEFCul4b-null cells cell of in the with TiPARP or in the after cells with TCDD or the after cells in for and or in for MEF cells in and for protein by the of protein from to on and to and as and Cell or mouse binding protein with by and to or levels WT MEF or MEFCul4b-null cells in Cell cell was with of of of protein and to control TiPARP gene the the from to in the of the mouse TiPARP gene was with the and after and with in to a cell with Cell for TiPARP by the WT and cells cell of in The cells with TCDD or cells with of or its control in the after with cells in for and to expression the in the and from MEF cells by the and the with the II was a of of cell and was of cells for The was while the was with The for the same the of the and nuclear and AHR protein in MEF cells by cells in on a cell of in with and The cells with or and by TCDD or cells in a of for and in in for with an AHR cells with two and with a with for two with and on an and a was as the nuclear of AHR S. of of the was by as a are in the and in the This The that have of with the of of for M. S. and A. B. R. M. S. C. and A. B. R. M. S. and A. B. R. M. S. and A. B. R. M. S. and A. B. R. and S. C. and A. B. R. S. S. and A. B. R. A. B. R. A. B. R. A. B. R. This was by the of of to A. B. R. and S. of and to The of is the of the and not the of the of