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The CALeDNA program: Citizen scientists and researchers inventory California's biodiversity

Rachel S. Meyer, Miroslava Munguia Ramos, Meixi Lin, Teia M. Schweizer, Zachary Gold, Dannise Ruiz Ramos, Sabrina Shirazi, Gaurav S. Kandlikar, Wai‐Yin Kwan, Emily Curd, Amanda C. Freise, Jordan Moberg Parker, Jason P. Sexton, Regina Wetzer, N. Dean Pentcheff, Adam Wall, Lenore Pipes, Ana E. Garcia‐Vedrenne, Maura Palacios Mejia, Tiara Moore, Chloé Orland, Kimberly M. Ballare, Anna Worth, Eric Beraut, Emma L. Aronson, Rasmus Nielsen, Harris A. Lewin, Paul H. Barber, Jeffrey D. Wall, Nathan J. B. Kraft, Beth Shapiro, Robert K. Wayne

2021California Agriculture44 citationsDOIOpen Access PDF

Abstract

Climate change is leading to habitat shifts that threaten species persistence throughout California's unique ecosystems. Baseline biodiversity data would provide opportunities for habitats to be managed under short-term and long-term environmental change. Aiming to provide biodiversity data, the UC Conservation Genomics Consortium launched the California Environmental DNA (CALeDNA) program to be a citizen and community science biomonitoring initiative that uses environmental DNA (eDNA, DNA shed from organisms such as from fur, feces, spores, pollen or leaves). Now with results from 1,000 samples shared online, California biodiversity patterns are discoverable. Soil, sediment and water collected by researchers, undergraduates and the public reveal a new catalog of thousands of organisms that only slightly overlap with traditional survey bioinventories. The CALeDNA website lets users explore the taxonomic diversity in different ways, and researchers have created tools to help people new to eDNA to analyze community ecology patterns. Although eDNA results are not always precise, the program team is making progress to fit it into California's biodiversity management toolbox, such as for monitoring ecosystem recovery after invasive species removal or wildfire.

Topics & Concepts

BiodiversityEnvironmental DNACitizen scienceHabitatEnvironmental resource managementEcosystemBaseline (sea)EcologyMetagenomicsEcosystem servicesGeographyBiologyEnvironmental scienceFisheryBiochemistryBotanyGeneEnvironmental DNA in Biodiversity StudiesSpecies Distribution and Climate ChangeMicrobial Community Ecology and Physiology